Application and integration of omics-powered diagnostics in clinical and public health microbiology / Jacob Moran-Gilad, Yael Yagel, editors.
Moran-Gilad, Jacob, editor.; Yagel, Yael, editor.
2021
RB43.7
Available Online

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Title Application and integration of omics-powered diagnostics in clinical and public health microbiology / Jacob Moran-Gilad, Yael Yagel, editors.
ISBN 9783030621551 (electronic bk.)
3030621553 (electronic bk.)
9783030621568 (print)
3030621561
9783030621575 (print)
303062157X
3030621545
9783030621544
DOI https://doi.org/10.1007/978-3-030-62155-1
Publication Details Cham : Springer, 2021.
Language English
Description 1 online resource
Item Number 10.1007/978-3-030-62155-1 doi
Call Number RB43.7
Dewey Decimal Classification 616.07/5
Summary Various omics methods have recently revolutionized molecular diagnostics. Next-generation sequencing (NGS) makes it possible to sequence a human genome in just one day. Whole genome sequencing (WGS) greatly improves the ability to investigate the outbreaks of numerous pathogens. Metagenomics helps to analyze the microbiome, which aids greatly in identifying the pathogenesis of infectious diseases. Proteomic-based methods, namely matrix-assisted laser desorption-ionization time of flight mass spectrometry (MALDI-TOF-MS), have a promising role in identifying myctobacteria and fungi, and predicting antimicrobial resistance. While there are numerous scientific publications on omics applications for microbiology, there are relatively few books that review this topic from a clinical diagnostics perspective. This book looks at this field from a holistic viewpoint, instead of limiting by type of omics technology, in order to cover the body of knowledge needed for practitioners and academics interested in clinical and public health microbiology. Additionally, it addresses the management, economical, regulatory and operational aspects of integrating these technologies into routine diagnostics.
Access Note Access limited to authorized users.
Digital File Characteristics text file
PDF
Source of Description Online resource; title from PDF title page (SpringerLink, viewed June 9, 2021).
Added Author Moran-Gilad, Jacob, editor.
Yagel, Yael, editor.
Available in Other Form Application and integration of omics-powered diagnostics in clinical and public health microbiology.
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Ch 1: Overview of Microbial NGS
Ch 2: WGS for Bacterial Identification and Susceptibility Testing
Ch 3: WGS for Bacterial Virulence Assessment
Ch 4: Epidemiological Typing by WGS
Ch 5: Bioinformatics Approaches for WGS Analysis
Ch 6: WGS for Clinical Virology
Ch 7: WGS for Clinical Mycology
Ch 8: WGS for Clinical Parasitology
Ch 9: Long Read Sequencing
Ch 10: Aspects of WGS Integration
Ch 11: Microbiome Analysis
Ch 12: Metagenomics of Environmental Samples
Ch 13: Clinical Metagenomics
Ch 14: Metagenomics for Pathogen Discovery
Ch 15: Advanced Applications for MALDI-TOF: Typing
Ch 16: Advanced Applications for MALDI-TOF: Infectious Diseases and Antibiotic Susceptibility Testing (AST)
Ch 17: Omics for Food and Water Microbiology
Ch 18: Omics for Forensic and Post-Mortem Microbiology
Ch 19: Omics for Antimicrobial Resistance Surveillance
Ch 20: Total Laboratory Automation.

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