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Part 1. Theory and philosophy
Biology as a process and the consequences for studying it
Capturing the genotype-phenotype map with the adaptive multiscape
Evolution plays a high-dimensional game
What is next for evolutionary systems biology?
Part 2. Single celled organisms
Experimental evolution of microbial host-parasite relations
Engineering microbial communities that evolve in a spatial setting
Sharing is caring: differential gene flow in microbial communities.-Synthetic biology to study the evolution of gene regulatory networks
Evolution of stem cell differentiation
The evolution of epigenetic switches and cellular clocks
Part 3. Multicellular organisms
Measuring the genotype-phenotype map in eukaryotes
Pigment evolution in Drosophila fly species: time for theory?
Birds of a feather: using experiment and theory to understand the evolution of feather patterning
A regulatory network that explains both fish fins and mouse limbs
Quantitative system drift of the fly body plan
Part 4. Immunity and disease
Of mice, men, and immunity
Immunity as an evolving adaptive system
Cancer is a microevolutionary systemic disease
A systems approach to cancer.

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