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1. Introduction to plant omics and systems biology
2. Modern approaches for transcriptome analyses in plants
3. Plant proteomics and systems biology
4. Subcellular proteomics as a unified approach of experimental localizations and computed prediction data for Arabidopsis and crop plants
5. The contribution of metabolomics to systems biology: current applications bridging genotype and phenotype in plant science
6. Interactomes: Experimental and in silico approaches
7. Probabilistic graphical models applied to biological networks
8. Cataloging posttranslational modifications in plant histones
9. Current challenges in plant systems biology
10. Contribution of omics and systems biology to plant biotechnology.

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