Sequence analysis and modern C++ : the creation of the SeqAn3 bioinformatics library / Hannes Hauswedell.
Hauswedell, Hannes.
2022
QA76.73.C153
Available Online

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Title Sequence analysis and modern C++ : the creation of the SeqAn3 bioinformatics library / Hannes Hauswedell.
Author Hauswedell, Hannes.
ISBN 9783030909901 (electronic bk.)
3030909905 (electronic bk.)
3030909891
9783030909895
DOI https://doi.org/10.1007/978-3-030-90990-1
Imprint Cham, Switzerland : Springer, 2022.
Language English
Description 1 online resource.
Other Standard Identifiers 10.1007/978-3-030-90990-1 doi
Call Number QA76.73.C153
Dewey Decimal Classification 005.13/3
Summary This is a book about software engineering, bioinformatics, the C++ programming language and the SeqAn library. In the broadest sense, it will help the reader create better, faster and more reliable software by deepening their understanding of available tools, language features, techniques and design patterns. Every developer who previously worked with C++ will enjoy the in-depth chapter on important changes in the language from C++11 up to and including C++20. In contrast to many resources on Modern C++ that present new features only in small isolated examples, this book represents a more holistic approach: readers will understand the relevance of new features and how they interact in the context of a large software project and not just within a "toy example". Previous experience in creating software with C++ is highly recommended to fully appreciate these aspects. SeqAn3 is a new, re-designed software library. The conception and implementation process is detailed in this book, including a critical reflection on the previous versions of the library. This is particularly helpful to readers who are about to create a large software project themselves, or who are planning a major overhaul of an existing library or framework. While the focus of the book is clearly on software development and design, it also touches on various organisational and administrative aspects like licensing, dependency management and quality control.
Bibliography, etc. Note Includes bibliographical references.
Access Note Access limited to authorized users.
Source of Description Online resource; title from PDF title page (SpringerLink, viewed March 17, 2022).
Series Computational biology.
Available in Other Form Print version: 9783030909895
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Record Appears in Online Resources > Ebooks
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Part I: Background
Sequence Analysis
The SeqAn library (version 1 & 2)
Modern C++
Part II: SeqAn3
The design of SeqAn3
Library structure and small modules
The Alphabet module
The Range module
The Input/Output module
The Search module
The Alignment module
Part III: Lambda
Lambda: an application built with SeqAn
Part IV: Conclusion and appendix
Conclusion
Appendix
References.

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