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Table of Contents
Intro
Preface
Contents
Contributors
Abbreviations
1 Designing Common Bean (Phaseolus vulgaris L.) for Abiotic Stress Tolerance
1.1 Introduction
1.2 Genetic Resources of Abiotic Stress Tolerance
1.3 Molecular Mapping of QTLs Underlying Abiotic Stress Tolerance
1.4 Genomic and Transcriptomic Resources
1.5 Prospects and Conclusions
References
2 A Scintillating Journey of Genomics in Simplifying Complex Traits and Development of Abiotic Stress Resilient Chickpeas
2.1 Introduction
2.2 Abiotic Stresses Affecting Chickpea
2.2.1 Drought Stress
2.2.2 Heat Stress
2.2.3 Cold Stress
2.2.4 Salinity Stress
2.3 Advancements in Genomics to Combat Abiotic Stress in Chickpea
2.4 Application of Transgenic Technology to Combat Abiotic Stresses in Chickpea
2.5 Chickpea Molecular Breeding Lines Released Using Genomic Tools
2.6 Application of Novel Breeding Approaches for Accelerating Abiotic Stress Tolerance in Chickpea
2.6.1 Multi-parent Populations
2.6.2 Speed Breeding
2.7 Emerging Stresses in the Context of Climate Change
2.8 Conclusions and Future Perspectives
References
3 Genomic Designing for Abiotic Stress Tolerance in Pea (Pisum Sativum L.)
3.1 Introduction
3.2 Key Abiotic Stresses
3.2.1 Heat Stress
3.2.2 Cold Stress
3.2.3 Drought Stress
3.2.4 Salinity
3.2.5 Waterlogging
3.2.6 Nutrient Use Efficiency
3.3 Genetic Resources
3.3.1 Primary and Secondary Gene Pool
3.3.2 Tertiary Gene Pool
3.4 Conventional Breeding for Abiotic Stress Resistance
3.5 Limitations of Conventional Breeding
3.6 Diversity Exploration
3.6.1 Phenotype-Based Diversity Analysis
3.6.2 Genotype-Based Diversity Analysis
3.7 Crop Wild Relatives
3.7.1 CWR and Their Geographical Distribution
3.7.2 Extent of Genetic Diversity in CWR
3.8 Association Mapping Studies
3.8.1 Linkage Disequilibrium (LD)
3.8.2 Target Gene-Based LD Studies
3.8.3 Genome-Wide LD Studies
3.8.4 Potential of Association Studies for Genetic Enhancement
3.9 Molecular Mapping of Resistance and Quantitative Trait Loci
3.9.1 Mapping Software Used
3.9.2 Classical Mapping Efforts
3.9.3 QTL Mapping
3.9.4 Mendelization of QTLs
3.10 Marker Assisted Breeding (MAB) for Resistance Traits
3.10.1 Marker-Assisted Gene Introgression
3.10.2 Gene Pyramiding (GP)
3.10.3 Limitations of Marker Assisted Selection
3.11 Map-Based Cloning of Resistance/Tolerance Genes/QTLs
3.11.1 Traits and Genes
3.11.2 Genomic Libraries
3.11.3 Test for Expression
3.12 Genomics Assisted Breeding
3.12.1 Genetic Resources
3.12.2 Genome Sequencing
3.12.3 Gene Annotation
3.12.4 Genomics Assisted Breeding Applications
3.13 Recent Concepts and Strategies
3.13.1 Targeting Induced Local Lesions in Genomes (TILLING)
3.13.2 Gene Editing
3.13.3 Nanotechnology
3.14 Genetic Engineering for Resistance/Tolerance Traits
Preface
Contents
Contributors
Abbreviations
1 Designing Common Bean (Phaseolus vulgaris L.) for Abiotic Stress Tolerance
1.1 Introduction
1.2 Genetic Resources of Abiotic Stress Tolerance
1.3 Molecular Mapping of QTLs Underlying Abiotic Stress Tolerance
1.4 Genomic and Transcriptomic Resources
1.5 Prospects and Conclusions
References
2 A Scintillating Journey of Genomics in Simplifying Complex Traits and Development of Abiotic Stress Resilient Chickpeas
2.1 Introduction
2.2 Abiotic Stresses Affecting Chickpea
2.2.1 Drought Stress
2.2.2 Heat Stress
2.2.3 Cold Stress
2.2.4 Salinity Stress
2.3 Advancements in Genomics to Combat Abiotic Stress in Chickpea
2.4 Application of Transgenic Technology to Combat Abiotic Stresses in Chickpea
2.5 Chickpea Molecular Breeding Lines Released Using Genomic Tools
2.6 Application of Novel Breeding Approaches for Accelerating Abiotic Stress Tolerance in Chickpea
2.6.1 Multi-parent Populations
2.6.2 Speed Breeding
2.7 Emerging Stresses in the Context of Climate Change
2.8 Conclusions and Future Perspectives
References
3 Genomic Designing for Abiotic Stress Tolerance in Pea (Pisum Sativum L.)
3.1 Introduction
3.2 Key Abiotic Stresses
3.2.1 Heat Stress
3.2.2 Cold Stress
3.2.3 Drought Stress
3.2.4 Salinity
3.2.5 Waterlogging
3.2.6 Nutrient Use Efficiency
3.3 Genetic Resources
3.3.1 Primary and Secondary Gene Pool
3.3.2 Tertiary Gene Pool
3.4 Conventional Breeding for Abiotic Stress Resistance
3.5 Limitations of Conventional Breeding
3.6 Diversity Exploration
3.6.1 Phenotype-Based Diversity Analysis
3.6.2 Genotype-Based Diversity Analysis
3.7 Crop Wild Relatives
3.7.1 CWR and Their Geographical Distribution
3.7.2 Extent of Genetic Diversity in CWR
3.8 Association Mapping Studies
3.8.1 Linkage Disequilibrium (LD)
3.8.2 Target Gene-Based LD Studies
3.8.3 Genome-Wide LD Studies
3.8.4 Potential of Association Studies for Genetic Enhancement
3.9 Molecular Mapping of Resistance and Quantitative Trait Loci
3.9.1 Mapping Software Used
3.9.2 Classical Mapping Efforts
3.9.3 QTL Mapping
3.9.4 Mendelization of QTLs
3.10 Marker Assisted Breeding (MAB) for Resistance Traits
3.10.1 Marker-Assisted Gene Introgression
3.10.2 Gene Pyramiding (GP)
3.10.3 Limitations of Marker Assisted Selection
3.11 Map-Based Cloning of Resistance/Tolerance Genes/QTLs
3.11.1 Traits and Genes
3.11.2 Genomic Libraries
3.11.3 Test for Expression
3.12 Genomics Assisted Breeding
3.12.1 Genetic Resources
3.12.2 Genome Sequencing
3.12.3 Gene Annotation
3.12.4 Genomics Assisted Breeding Applications
3.13 Recent Concepts and Strategies
3.13.1 Targeting Induced Local Lesions in Genomes (TILLING)
3.13.2 Gene Editing
3.13.3 Nanotechnology
3.14 Genetic Engineering for Resistance/Tolerance Traits