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Table of Contents
1. Introduction
Part I.Finite Genotype Space
2. The Quasispecies equation
3. Non-Overlapping Generations
4. Overlapping Generations
5. Probabilistic Representations
Part II. The Sharp Peak Landscape
6. Long Chain Regime
7. Error Threshold and Quasispecies
8. Probabilistic Derivation
9. Summation of the Series
10. Error Threshold in Infinite Populations
Part III. Error Threshold in Finite Populations
11.Phase Transition
12. Computer Simulations
13. Heuristics
14. Shape of the Critical Curve
15. Framework for the Proofs
Part IV. Proof for Wright-Fisher
16. Strategy of the Proof
17. The Non-Neutral Phase M
18. Mutation Dynamics
19. The Neutral Phase N
20. Synthesis
Part V. Class-Dependent Fitness Landscapes
21. Generalized Quasispecies Distributions
22. Error Threshold
23. Probabilistic Representation
24. Probabilistic Interpretations
25. Infinite Population Models
Part VI. A Glimpse at the Dynamics
26. Deterministic Level
27. From Finite to Infinite Population
28. Class-Dependent Landscapes
A. Markov Chains and Classical Results
References
Index.
Part I.Finite Genotype Space
2. The Quasispecies equation
3. Non-Overlapping Generations
4. Overlapping Generations
5. Probabilistic Representations
Part II. The Sharp Peak Landscape
6. Long Chain Regime
7. Error Threshold and Quasispecies
8. Probabilistic Derivation
9. Summation of the Series
10. Error Threshold in Infinite Populations
Part III. Error Threshold in Finite Populations
11.Phase Transition
12. Computer Simulations
13. Heuristics
14. Shape of the Critical Curve
15. Framework for the Proofs
Part IV. Proof for Wright-Fisher
16. Strategy of the Proof
17. The Non-Neutral Phase M
18. Mutation Dynamics
19. The Neutral Phase N
20. Synthesis
Part V. Class-Dependent Fitness Landscapes
21. Generalized Quasispecies Distributions
22. Error Threshold
23. Probabilistic Representation
24. Probabilistic Interpretations
25. Infinite Population Models
Part VI. A Glimpse at the Dynamics
26. Deterministic Level
27. From Finite to Infinite Population
28. Class-Dependent Landscapes
A. Markov Chains and Classical Results
References
Index.