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Table of Contents
Intro
Preface
Contents
Contributors
Abbreviations
1 Genomic Designing for Biotic Stress Resistant Cassava
1.1 Biotic Stress in Cassava
1.1.1 Prevalent Cassava Biotic Factors
1.1.2 Regional Incidence of Cassava Pests and Diseases
1.1.3 Economic Impact of Biotic Stress on Cassava Production and Utilization
1.2 Biotic Factors Affecting Cassava Production
1.2.1 Diseases
1.2.2 Pests
1.3 Approaches for Developing Biotic Stress Resistant Cassava Varieties
1.3.1 Conventional Breeding Approach for Developing Biotic Stress Resistant Cassava Varieties
1.3.2 Molecular Techniques for Biotic Stress Improvement in Cassava
1.3.3 The Adoption of Genetic Engineering in Genomic Designing for Biotic Stress Resistant Cassava
1.3.4 Genome Editing in Genomic Designing for Biotic Stress Resistant Cassava
1.4 Future Perspectives in the Genomic Designing for Biotic Stress Resistant Cassava
References
2 Genomic Designing for Biotic Stress Resistant Cocoa Tree
2.1 Introduction
2.2 Description on Different Biotic Stresses
2.2.1 Frosty Pod Rot of Cocoa
2.2.2 Witches' Broom Disease
2.2.3 Black Pod Rot
2.2.4 Ceratocystis Wilt of Cacao
2.2.5 Cocoa Swollen Shoot Virus
2.2.6 Other Diseases and Pests
2.3 Genetic Resources of Resistance Genes
2.4 Glimpses on Classical Genetics and Traditional Breeding
2.4.1 Breeding Objectives
2.4.2 Classical Mapping Efforts
2.4.3 Classical Breeding Achievements
2.4.4 Limitations of Traditional Breeding and Rationale for Molecular Breeding
2.5 Brief on Diversity Analysis of Cocoa Germplasm
2.5.1 Phenotype-Based Diversity Analysis
2.5.2 Genotype-Based Diversity Analysis
2.6 Brief Account of Molecular Mapping of Resistance Genes and QTLs
2.6.1 Genetic Maps of Cocoa, Marker Evolution and Segregating Populations
2.6.2 QTL Regions Disease Resistance in Cocoa
2.7 Cocoa Germplasm Characterization
2.8 Map-Based Cloning of Resistance Genes
2.8.1 BAC Libraries
2.8.2 Cytogenetic Studies
2.9 Genomics-Aided Breeding for Resistance Traits
2.9.1 Large Scale Transcriptomic Resources
2.9.2 Genome Sequencing
2.9.3 Proteomics Resources
2.9.4 Bases for Marker Assisted Selection
2.10 Brief on Genetic Engineering for Resistance Traits and Recent Concepts and Strategies Developed
2.10.1 Review on Achievements of Transgenics
2.10.2 Genome Editing
2.10.3 Nanotechnology
2.11 Brief Account on Tole of Bioinformatics as a Tool
2.11.1 Gene and Genome Databases
2.11.2 Comparative Genome Databases
2.11.3 Gene Expression Databases
2.11.4 Protein Databases
2.11.5 Integration of Different Data
References
3 Genomic Designing for Biotic Stress Resistance in Coconut
3.1 Introduction
3.2 Diseases of Coconut
3.2.1 Leaf Rot
3.2.2 Bud Rot
Preface
Contents
Contributors
Abbreviations
1 Genomic Designing for Biotic Stress Resistant Cassava
1.1 Biotic Stress in Cassava
1.1.1 Prevalent Cassava Biotic Factors
1.1.2 Regional Incidence of Cassava Pests and Diseases
1.1.3 Economic Impact of Biotic Stress on Cassava Production and Utilization
1.2 Biotic Factors Affecting Cassava Production
1.2.1 Diseases
1.2.2 Pests
1.3 Approaches for Developing Biotic Stress Resistant Cassava Varieties
1.3.1 Conventional Breeding Approach for Developing Biotic Stress Resistant Cassava Varieties
1.3.2 Molecular Techniques for Biotic Stress Improvement in Cassava
1.3.3 The Adoption of Genetic Engineering in Genomic Designing for Biotic Stress Resistant Cassava
1.3.4 Genome Editing in Genomic Designing for Biotic Stress Resistant Cassava
1.4 Future Perspectives in the Genomic Designing for Biotic Stress Resistant Cassava
References
2 Genomic Designing for Biotic Stress Resistant Cocoa Tree
2.1 Introduction
2.2 Description on Different Biotic Stresses
2.2.1 Frosty Pod Rot of Cocoa
2.2.2 Witches' Broom Disease
2.2.3 Black Pod Rot
2.2.4 Ceratocystis Wilt of Cacao
2.2.5 Cocoa Swollen Shoot Virus
2.2.6 Other Diseases and Pests
2.3 Genetic Resources of Resistance Genes
2.4 Glimpses on Classical Genetics and Traditional Breeding
2.4.1 Breeding Objectives
2.4.2 Classical Mapping Efforts
2.4.3 Classical Breeding Achievements
2.4.4 Limitations of Traditional Breeding and Rationale for Molecular Breeding
2.5 Brief on Diversity Analysis of Cocoa Germplasm
2.5.1 Phenotype-Based Diversity Analysis
2.5.2 Genotype-Based Diversity Analysis
2.6 Brief Account of Molecular Mapping of Resistance Genes and QTLs
2.6.1 Genetic Maps of Cocoa, Marker Evolution and Segregating Populations
2.6.2 QTL Regions Disease Resistance in Cocoa
2.7 Cocoa Germplasm Characterization
2.8 Map-Based Cloning of Resistance Genes
2.8.1 BAC Libraries
2.8.2 Cytogenetic Studies
2.9 Genomics-Aided Breeding for Resistance Traits
2.9.1 Large Scale Transcriptomic Resources
2.9.2 Genome Sequencing
2.9.3 Proteomics Resources
2.9.4 Bases for Marker Assisted Selection
2.10 Brief on Genetic Engineering for Resistance Traits and Recent Concepts and Strategies Developed
2.10.1 Review on Achievements of Transgenics
2.10.2 Genome Editing
2.10.3 Nanotechnology
2.11 Brief Account on Tole of Bioinformatics as a Tool
2.11.1 Gene and Genome Databases
2.11.2 Comparative Genome Databases
2.11.3 Gene Expression Databases
2.11.4 Protein Databases
2.11.5 Integration of Different Data
References
3 Genomic Designing for Biotic Stress Resistance in Coconut
3.1 Introduction
3.2 Diseases of Coconut
3.2.1 Leaf Rot
3.2.2 Bud Rot