Recomb Retrospectives
The Second Decade of the International Conference on Research in Computational Molecular Biology (RECOMB)
Extended Abstracts
A MAD-Bayes Algorithm for State-space Inference and Clustering with Application to Querying Large Collections of ChIP-Seq Data Sets
Accurate Recovery of Ribosome Positions Reveals Slow Translation of Wobble-Pairing Codons in Yeast
Multitask matrix completion for learning protein interactions across diseases
pathTiMEx: Joint Inference of Mutually Exclusive Cancer Pathways and their Dependencies in Tumor Progression
Clonality inference from single tumor samples using low coverage sequence data
Flexible Modelling of Genetic Effects on Function-Valued Traits
MetaFlow: Metagenomic profiling based on whole-genome coverage analysis with min-cost flows
LUTE (Local Unpruned Tuple Expansion): Accurate continuously flexible protein design with general energy functions and rigid-rotamerlike efficiency
Improving Bloom filter performance on sequence data using k-mer Bloom filters.-Safe and complete contig assembly via omnitigs
Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants.-Structural variation detection with read pair information { An improved null-hypothesis reduces bias
On Computing Breakpoint Distances for Genomes with Duplicate Genes
New Genome Similarity Measures based on Conserved Gene Adjacencies
Fast Phylogenetic Biodiversity Computations Under a Non-Uniform Random Distribution
Short Abstracts
SLICER: Inferring Branched, Nonlinear Cellular Trajectories from Single Cell RNA-seq Data
Multi-track modeling for genome-scale reconstruction of 3D chromatin structure from Hi-C data
Revealing the Genetic Basis of Immune Traits in the Absence of Experimental Immunophenotyping
Shall we dense? Comparing design strategies for time series expression experiments
Enabling Privacy-Preserving GWAS in Heterogeneous Human Populations
Efficient Privacy-Preserving Read Mapping Using Locality Sensitive Hashing and Secure Kmer Voting
Finding Mutated Subnetworks Associated with Survival Time in Cancer
Multi-State Perfect Phylogeny Mixture Deconvolution and Applications to Cancer Sequencing
Tree inference for single-cell data
mLDM: a new hierarchical Bayesian statistical model for sparse microbial association discovery
Low-density locality-sensitive hashing boosts metagenomic binning
metaSPAdes: a new versatile de novo metagenomics assembler
Distributed Gradient Descent in Bacterial Food Search.-AptaTRACE: Elucidating Sequence-Structure Binding Motifs by Uncovering Selection Trends in HT-SELEX Experiments
Fast Bayesian Inference of Copy Number Variants using Hidden Markov Models with Wavelet Compression
Allele-Specific Quantification of Structural Variations in Cancer Genomes
Assembly of Long Error-Prone Reads Using de Bruijn Graphs
Locating a Tree in a Reticulation-Visible Network in Cubic Time
Joint alignment of multiple protein-protein interaction networks via convex optimization
Complexes Detection in Biological Networks via Diversified Dense Subgraphs Mining.