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Introduction and a brief phylogenetics primer
Phylogenetic nonindependence, comparative ecology, and phylogenetic conservatism
The measurement of phylogenetic diversity
Community assembly: phylogenies as a proxy
Community assembly: phylogenies as a backbone
Global patterns of biodiversity, diversification, conservatism, and priority
Functional phylogenomics for ecology
Building trees for every system and scale and biodiversity informatics
Conclusions and remodeling phylogenetic ecology.

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